Package picard.util.IntervalList

Class IntervalListScattererByIntervalCountWithDistributedRemainder

java.lang.Object
picard.util.IntervalList.IntervalListScattererByIntervalCount
picard.util.IntervalList.IntervalListScattererByIntervalCountWithDistributedRemainder
All Implemented Interfaces:
IntervalListScatterer
public class IntervalListScattererByIntervalCountWithDistributedRemainder extends IntervalListScattererByIntervalCount
Scatters IntervalList by into `interval count` shards so that resulting IntervalList's have approximately same number of intervals in them. The "remainder" intervals are distributed over the last lists.

  • Constructor Details

    • IntervalListScattererByIntervalCountWithDistributedRemainder

      public IntervalListScattererByIntervalCountWithDistributedRemainder()

  • Method Details

    • takeSome

      public List<htsjdk.samtools.util.Interval> takeSome(htsjdk.samtools.util.Interval interval, long idealSplitWeight, long currentSize, double projectSizeOfRemaining)
      Description copied from interface: IntervalListScatterer
      Figure out how much of the input interval to put into current list and how much to leave for the next interval list.
      Specified by:
      takeSome in interface IntervalListScatterer
      Overrides:
      takeSome in class IntervalListScattererByIntervalCount
      Parameters:
      interval -
      Returns:
      a list of two (possibly null) elements. The first element should be added to the current interval list, the second should be offered to the next interval list.