VariantAccumulatorExecutor (picard 3.4.0 API)

All Known Implementing Classes:: VariantAccumulatorExecutor.MultiThreadedChunkBased

public interface VariantAccumulatorExecutor<ACCUMULATOR extends VariantProcessor.Accumulator<RESULT>,RESULT>

Describes the functionality for an executor that manages the delegation of work to VariantProcessor.Accumulators.

Nested Class Summary

Nested Classes

Modifier and Type

Interface

Description

static class

VariantAccumulatorExecutor.MultiThreadedChunkBased<A extends VariantProcessor.Accumulator<R>,R>

A VariantAccumulatorExecutor that breaks down work into chunks described by the provided VariantIteratorProducer and spreads them over the indicated number of threads.
Method Summary

Modifier and Type

Method

Description

Collection<ACCUMULATOR>

accumulators()

Returns the VariantProcessor.Accumulators associated with this executor.

void

awaitCompletion()

Blocks until the work is complete.

void

start()

Starts the work of the executor, returning immediately.

Method Details
- start
  
  void start()
  
  Starts the work of the executor, returning immediately.
- awaitCompletion
  
  void awaitCompletion() throws InterruptedException
  
  Blocks until the work is complete.
  
  Throws:
  
  InterruptedException
- accumulators
  
  Collection<ACCUMULATOR> accumulators()
  
  Returns the VariantProcessor.Accumulators associated with this executor.